CRISPRone

CRISPRone report for GCA_000481605.1_Pseu_aeru_BWH005_V1

♦ Seq 1: KI519153.1 Pseudomonas aeruginosa BWHPSA005 genomic scaffold adgfj-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 5164862 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1679238-1679807 bp 2 Locus 2: 3162143-3172321 bp Zoom in on locus 1 x10 Zoom in on locus 2 x12 x10 CRISPR array Location: 1679238-1679807 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1679238-1679807 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 3162143-3162830 bp Num of repeats: 12 Spacers: s10-s20 CRISPR array Location: 3162143-3162830 bp Num of repeats: 12 Spacers: s10-s20 Gene: cd09739:cas6f Type: other Location: 3163013-3163576 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3163580-3164608 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3164619-3165602 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3165589-3166890 bp Gene: COG1203:cas3 Type: Type-I Location: 3167301-3170531 bp Gene: cd09718:cas1 Type: universal Location: 3170528-3171502 bp CRISPR array Location: 3171754-3172321 bp Num of repeats: 10 Spacers: s21-s29 CRISPR array Location: 3171754-3172321 bp Num of repeats: 10 Spacers: s21-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1679238-1679807 bp]: array | spacers
           [Locus range 3162143-3162830 bp]: array | spacers
           [Locus range 3171754-3172321 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)