CRISPRone

CRISPRone report for GCA_000481625.1_Pseu_aeru_BWH004_V1

♦ Seq 1: KI519157.1 Pseudomonas aeruginosa BWHPSA004 genomic scaffold adgfZ-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 5611027 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 788122-788751 bp 2 Locus 2: 2077113-2088500 bp Zoom in on locus 1 x11 Zoom in on locus 2 x26 x16 CRISPR array Location: 788122-788751 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 788122-788751 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 2077113-2078638 bp Num of repeats: 26 Spacers: s11-s35 CRISPR array Location: 2077113-2078638 bp Num of repeats: 26 Spacers: s11-s35 Gene: cd09739:cas6f Type: other Location: 2078822-2079385 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2079389-2080417 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2080428-2081411 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2081398-2082699 bp Gene: COG1203:cas3 Type: Type-I Location: 2083110-2086340 bp Gene: cd09718:cas1 Type: universal Location: 2086337-2087311 bp CRISPR array Location: 2087572-2088500 bp Num of repeats: 16 Spacers: s36-s50 CRISPR array Location: 2087572-2088500 bp Num of repeats: 16 Spacers: s36-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 788122-788751 bp]: array | spacers
           [Locus range 2077113-2078638 bp]: array | spacers
           [Locus range 2087572-2088500 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)