CRISPRone

CRISPRone report for GCA_000481685.1_Pseu_aeru_BWH001_V1

♦ Seq 1: KI519184.1 Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 3122946 bp; # of CRISPR array = 4; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1551931-1552801 bp 2 Locus 2: 2847117-2857084 bp Zoom in on locus 1 x15 Zoom in on locus 2 x3 x8 x12 CRISPR array Location: 1551931-1552801 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 1551931-1552801 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 2847117-2847266 bp Num of repeats: 3 Spacers: s15-s16 CRISPR array Location: 2847117-2847266 bp Num of repeats: 3 Spacers: s15-s16 Gene: cd09739:cas6f Type: other Location: 2847449-2848012 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2848016-2849044 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2849055-2850038 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2850025-2851329 bp Gene: COG1203:cas3 Type: Type-I Location: 2851387-2854617 bp Gene: cd09718:cas1 Type: universal Location: 2854614-2855588 bp CRISPR array Location: 2855849-2856296 bp Num of repeats: 8 Spacers: s17-s23 CRISPR array Location: 2855849-2856296 bp Num of repeats: 8 Spacers: s17-s23 CRISPR array Location: 2856397-2857084 bp Num of repeats: 12 Spacers: s24-s34 CRISPR array Location: 2856397-2857084 bp Num of repeats: 12 Spacers: s24-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1551931-1552801 bp]: array | spacers
           [Locus range 2847117-2847266 bp]: array | spacers
           [Locus range 2855849-2856296 bp]: array | spacers
           [Locus range 2856397-2857084 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)