CRISPRone

CRISPRone report for GCA_000481885.1_Pseu_aeru_CF5_V1

♦ Seq 1: KI519271.1 Pseudomonas aeruginosa CF5 genomic scaffold adgfB-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 2727411 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2079061-2089600 bp Zoom in on locus 1 x12 x16 CRISPR array Location: 2079061-2079749 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2079061-2079749 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 2079932-2080495 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2080499-2081527 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2081538-2082521 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2082508-2083809 bp Gene: COG1203:cas3 Type: Type-I Location: 2084220-2087450 bp Gene: cd09718:cas1 Type: universal Location: 2087447-2088421 bp CRISPR array Location: 2088673-2089600 bp Num of repeats: 16 Spacers: s12-s26 CRISPR array Location: 2088673-2089600 bp Num of repeats: 16 Spacers: s12-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2079061-2079749 bp]: array | spacers
           [Locus range 2088673-2089600 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)