CRISPRone

CRISPRone report for GCA_000481925.1_Pseu_aeru_CF18_V1

♦ Seq 1: KI519281.1 Pseudomonas aeruginosa CF18 genomic scaffold adgfD-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 4204068 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 709878-710507 bp 2 Locus 2: 2112420-2121587 bp Zoom in on locus 1 x11 Zoom in on locus 2 x3 x8 CRISPR array Location: 709878-710507 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 709878-710507 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 2112420-2112567 bp Num of repeats: 3 Spacers: s11-s12 CRISPR array Location: 2112420-2112567 bp Num of repeats: 3 Spacers: s11-s12 Gene: cd09739:cas6f Type: other Location: 2112749-2113312 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2113316-2114344 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2114355-2115338 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2115325-2116629 bp Gene: COG1203:cas3 Type: Type-I Location: 2116687-2119917 bp Gene: cd09718:cas1 Type: universal Location: 2119914-2120888 bp CRISPR array Location: 2121140-2121587 bp Num of repeats: 8 Spacers: s13-s19 CRISPR array Location: 2121140-2121587 bp Num of repeats: 8 Spacers: s13-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 709878-710507 bp]: array | spacers
           [Locus range 2112420-2112567 bp]: array | spacers
           [Locus range 2121140-2121587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)