CRISPRone

CRISPRone report for GCA_000481965.1_Pseu_aeru_MSH10_V1

♦ Seq 1: KI519294.1 Pseudomonas aeruginosa MSH10 genomic scaffold adgfw-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 4104451 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 775119-775687 bp 2 Locus 2: 2137566-2146800 bp Zoom in on locus 1 x10 Zoom in on locus 2 x9 x3 CRISPR array Location: 775119-775687 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 775119-775687 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 2137566-2138073 bp Num of repeats: 9 Spacers: s10-s17 CRISPR array Location: 2137566-2138073 bp Num of repeats: 9 Spacers: s10-s17 Gene: cd09739:cas6f Type: other Location: 2138256-2138819 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2138823-2139851 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2139862-2140845 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2140832-2142136 bp Gene: COG1203:cas3 Type: Type-I Location: 2142194-2145424 bp Gene: cd09718:cas1 Type: universal Location: 2145421-2146395 bp CRISPR array Location: 2146653-2146800 bp Num of repeats: 3 Spacers: s18-s19 CRISPR array Location: 2146653-2146800 bp Num of repeats: 3 Spacers: s18-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 775119-775687 bp]: array | spacers
           [Locus range 2137566-2138073 bp]: array | spacers
           [Locus range 2146653-2146800 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)