CRISPRone

CRISPRone report for GCA_000482005.1_Pseu_aeru_E2_V1

♦ Seq 1: KI519305.1 Pseudomonas aeruginosa E2 genomic scaffold adgft-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 2388379 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 783582-784211 bp 2 Locus 2: 2116997-2127175 bp Zoom in on locus 1 x11 Zoom in on locus 2 x16 x6 CRISPR array Location: 783582-784211 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 783582-784211 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 2116997-2117925 bp Num of repeats: 16 Spacers: s11-s25 CRISPR array Location: 2116997-2117925 bp Num of repeats: 16 Spacers: s11-s25 Gene: cd09739:cas6f Type: other Location: 2118107-2118670 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2118674-2119702 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2119713-2120696 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2120683-2121984 bp Gene: COG1203:cas3 Type: Type-I Location: 2122395-2125625 bp Gene: cd09718:cas1 Type: universal Location: 2125622-2126596 bp CRISPR array Location: 2126848-2127175 bp Num of repeats: 6 Spacers: s26-s30 CRISPR array Location: 2126848-2127175 bp Num of repeats: 6 Spacers: s26-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 783582-784211 bp]: array | spacers
           [Locus range 2116997-2117925 bp]: array | spacers
           [Locus range 2126848-2127175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)