CRISPRone

CRISPRone report for GCA_000505805.1_P.aer_PFK10

♦ Seq 1: AZBM01000090.1 Pseudomonas aeruginosa PFK10 contig00094, whole genome shotgun sequence

⇒Summary: seq-len = 8654 bp; # of CRISPR array = 0; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 215-8350 bp Zoom in on locus 1 Gene: cd09739:cas6f Type: other Location: 215-778 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 782-1264 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1216-1695 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1819-2355 bp Gene: pfam09614:cas5f Type: Subtype-I-F Location: 2321-2800 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2787-4091 bp Gene: COG1203:cas3 Type: Type-I Location: 4149-7379 bp Gene: cd09718:cas1 Type: universal Location: 7376-8350 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AZBM01000054.1 Pseudomonas aeruginosa PFK10 contig00058, whole genome shotgun sequence

⇒Summary: seq-len = 440 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8-98 bp Zoom in on locus 1 x2 CRISPR array Location: 8-98 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 8-98 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8-98 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AZBM01000053.1 Pseudomonas aeruginosa PFK10 contig00057, whole genome shotgun sequence

⇒Summary: seq-len = 46048 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 45961-46049 bp Zoom in on locus 1 x2 CRISPR array Location: 45961-46049 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 45961-46049 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 45961-46049 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)