CRISPRone

CRISPRone report for GCA_000505825.1_P.aer_PK6

♦ Seq 1: AZBN01000083.1 Pseudomonas aeruginosa PK6 contig00087, whole genome shotgun sequence

⇒Summary: seq-len = 219 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9-216 bp Zoom in on locus 1 x4 CRISPR array Location: 9-216 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 9-216 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 9-216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AZBN01000082.1 Pseudomonas aeruginosa PK6 contig00086, whole genome shotgun sequence

⇒Summary: seq-len = 4509 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14-4215 bp Zoom in on locus 1 Gene: COG1203:cas3 Type: Type-I Location: 14-3244 bp Gene: cd09718:cas1 Type: universal Location: 3241-4215 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AZBN01000081.1 Pseudomonas aeruginosa PK6 contig00085, whole genome shotgun sequence

⇒Summary: seq-len = 4059 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 215-4058 bp Zoom in on locus 1 Gene: cd09739:cas6f Type: other Location: 215-778 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 782-1696 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1820-2803 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2790-4058 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)