CRISPRone

CRISPRone report for GCA_000520395.1_Pseu_aeru_BWHPSA040_V1

♦ Seq 1: KI914527.1 Pseudomonas aeruginosa BWHPSA040 genomic scaffold adkfQ-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 4926464 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1492226-1492855 bp 2 Locus 2: 2794848-2806715 bp Zoom in on locus 1 x11 Zoom in on locus 2 x25 x25 CRISPR array Location: 1492226-1492855 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 1492226-1492855 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 2794848-2796313 bp Num of repeats: 25 Spacers: s11-s34 CRISPR array Location: 2794848-2796313 bp Num of repeats: 25 Spacers: s11-s34 Gene: cd09739:cas6f Type: other Location: 2796497-2797060 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2797064-2798092 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2798103-2799086 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2799073-2800374 bp Gene: COG1203:cas3 Type: Type-I Location: 2800785-2804015 bp Gene: cd09718:cas1 Type: universal Location: 2804012-2804986 bp CRISPR array Location: 2805247-2806715 bp Num of repeats: 25 Spacers: s35-s58 CRISPR array Location: 2805247-2806715 bp Num of repeats: 25 Spacers: s35-s58 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1492226-1492855 bp]: array | spacers
           [Locus range 2794848-2796313 bp]: array | spacers
           [Locus range 2805247-2806715 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)