CRISPRone

CRISPRone report for GCA_000520435.1_Pseu_aeru_BWHPSA038_V1

♦ Seq 1: KI914540.1 Pseudomonas aeruginosa BWHPSA038 genomic scaffold adkfW-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 6367808 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2606884-2619228 bp Zoom in on locus 1 x20 x7 x3 CRISPR array Location: 2606884-2608053 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 2606884-2608053 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09739:cas6f Type: other Location: 2608236-2608799 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2608803-2609831 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2609842-2610825 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2610812-2612116 bp Gene: COG1203:cas3 Type: Type-I Location: 2612174-2615404 bp Gene: cd09718:cas1 Type: universal Location: 2615401-2616375 bp CRISPR array Location: 2616636-2617023 bp Num of repeats: 7 Spacers: s20-s25 CRISPR array Location: 2616636-2617023 bp Num of repeats: 7 Spacers: s20-s25 CRISPR array Location: 2619081-2619228 bp Num of repeats: 3 Spacers: s26-s27 CRISPR array Location: 2619081-2619228 bp Num of repeats: 3 Spacers: s26-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2606884-2608053 bp]: array | spacers
           [Locus range 2616636-2617023 bp]: array | spacers
           [Locus range 2619081-2619228 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)