CRISPRone

CRISPRone report for GCA_000531625.1_CD002

♦ Seq 1: HF929263.1 Clostridium difficile CD002 genomic scaffold, 2335_43, whole genome shotgun sequence

⇒Summary: seq-len = 56115 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45585-45880 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: HF929259.1 Clostridium difficile CD002 genomic scaffold, 2335_39, whole genome shotgun sequence

⇒Summary: seq-len = 51463 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1485-1580 bp]: array | spacers
           [Locus range 39696-40246 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: HF929270.1 Clostridium difficile CD002 genomic scaffold, 2335_50, whole genome shotgun sequence

⇒Summary: seq-len = 11519 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9700-9861 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: HF929261.1 Clostridium difficile CD002 genomic scaffold, 2335_41, whole genome shotgun sequence

⇒Summary: seq-len = 37647 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28740-29689 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: HF929267.1 Clostridium difficile CD002 genomic scaffold, 2335_47, whole genome shotgun sequence

⇒Summary: seq-len = 85123 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13826-14184 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: HF929271.1 Clostridium difficile CD002 genomic scaffold, 2335_51, whole genome shotgun sequence

⇒Summary: seq-len = 231882 bp; # of CRISPR array = 0; # of cas gene = 9  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: HF929264.1 Clostridium difficile CD002 genomic scaffold, 2335_44, whole genome shotgun sequence

⇒Summary: seq-len = 85149 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 70875-71036 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: HF929281.1 Clostridium difficile CD002 genomic scaffold, 2335_61, whole genome shotgun sequence

⇒Summary: seq-len = 84891 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 2414-3889 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: HF929282.1 Clostridium difficile CD002 genomic scaffold, 2335_62, whole genome shotgun sequence

⇒Summary: seq-len = 181964 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 160608-161491 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)