CRISPRone

CRISPRone report for GCA_000598145.1_ASM59814v1

♦ Seq 1: JGCO01000358.1 Bacteroides fragilis str. 2-F-2 #7 gbf2F27.contig.359, whole genome shotgun sequence

⇒Summary: seq-len = 102843 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19856-23466 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 19856-20524 bp Gene: unk Type: unknown Location: 20527-21297 bp Gene: unk Type: unknown Location: 21305-22570 bp Gene: pfam13280:WYL Type: other Location: 22567-23466 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGCO01000182.1 Bacteroides fragilis str. 2-F-2 #7 gbf2F27.contig.182, whole genome shotgun sequence

⇒Summary: seq-len = 37297 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29156-36724 bp Zoom in on locus 1 x10 antiRepeat Location: 29156-29201 bp Strand: + Match length: 26 bp Mismatch: 21 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 29269-33579 bp Gene: unk Type: unknown Location: 33595-33993 bp Gene: unk Type: unknown Location: 34184-34474 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 34611-35543 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 35547-35879 bp CRISPR array Location: 35988-36724 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 35988-36724 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 35988-36724 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)