CRISPRone

CRISPRone report for GCA_000598425.1_ASM59842v1

♦ Seq 1: JGCQ01000406.1 Bacteroides fragilis str. 34-F-2 #13 gbf34F213.contig.408, whole genome shotgun sequence

⇒Summary: seq-len = 98686 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 688-8255 bp Zoom in on locus 1 x10 CRISPR array Location: 688-1423 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 688-1423 bp Num of repeats: 10 Spacers: s1-s9 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 1532-1864 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 1868-2800 bp Gene: unk Type: unknown Location: 2937-3227 bp Gene: unk Type: unknown Location: 3418-3816 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 3832-8142 bp antiRepeat Location: 8210-8255 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 688-1423 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGCQ01000368.1 Bacteroides fragilis str. 34-F-2 #13 gbf34F213.contig.370, whole genome shotgun sequence

⇒Summary: seq-len = 94035 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28948-32558 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 28948-29616 bp Gene: unk Type: unknown Location: 29619-30389 bp Gene: unk Type: unknown Location: 30397-31662 bp Gene: pfam13280:WYL Type: other Location: 31659-32558 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)