CRISPRone

CRISPRone report for GCA_000598445.1_ASM59844v1

♦ Seq 1: JGCW01000340.1 Bacteroides fragilis str. 3986 N(B)19 gbf3986NB19.contig.342, whole genome shotgun sequence

⇒Summary: seq-len = 19960 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-3613 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 3-668 bp Gene: unk Type: unknown Location: 671-1444 bp Gene: unk Type: unknown Location: 1452-2717 bp Gene: pfam13280:WYL Type: other Location: 2714-3613 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGCW01000394.1 Bacteroides fragilis str. 3986 N(B)19 gbf3986NB19.contig.398, whole genome shotgun sequence

⇒Summary: seq-len = 33751 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 122-8043 bp Zoom in on locus 1 x16 CRISPR array Location: 122-1321 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 122-1321 bp Num of repeats: 16 Spacers: s1-s15 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 1430-1762 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 1766-2698 bp Gene: unk Type: unknown Location: 2818-3126 bp Gene: unk Type: unknown Location: 3193-3717 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 3733-8043 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 122-1321 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)