CRISPRone

CRISPRone report for GCA_000598565.1_ASM59856v1

♦ Seq 1: JGDN01000065.1 Bacteroides fragilis str. 3397 N2 gbf3397N2.contig.64, whole genome shotgun sequence

⇒Summary: seq-len = 244242 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 109843-125896 bp Zoom in on locus 1 x35 Gene: cls000004:cas6 Type: other Location: 109843-110511 bp Gene: unk Type: unknown Location: 110529-111155 bp Gene: unk Type: unknown Location: 111131-111964 bp Gene: cash17:cash17 Type: Type- Location: 111955-113382 bp Gene: unk Type: unknown Location: 113379-113858 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 113872-115281 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 115286-117088 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 117081-118220 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 118240-119079 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 119092-119502 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 119505-120449 bp Gene: cd09634:cas1 Type: universal Location: 120469-122739 bp Gene: cd09725:cas2 Type: universal Location: 122733-123023 bp CRISPR array Location: 123471-125896 bp Num of repeats: 35 Spacers: s1-s34 CRISPR array Location: 123471-125896 bp Num of repeats: 35 Spacers: s1-s34 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 123471-125896 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGDN01000073.1 Bacteroides fragilis str. 3397 N2 gbf3397N2.contig.72, whole genome shotgun sequence

⇒Summary: seq-len = 138404 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120359-123972 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 120359-121027 bp Gene: unk Type: unknown Location: 121030-121803 bp Gene: unk Type: unknown Location: 121811-123076 bp Gene: pfam13280:WYL Type: other Location: 123073-123972 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)