CRISPRone

CRISPRone report for GCA_000598645.1_ASM59864v1

♦ Seq 1: JGDV01000056.1 Bacteroides fragilis str. J38-1 gbfJ381.contig.55, whole genome shotgun sequence

⇒Summary: seq-len = 434421 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 81252-84865 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 81252-81920 bp Gene: unk Type: unknown Location: 81923-82696 bp Gene: unk Type: unknown Location: 82704-83969 bp Gene: pfam13280:WYL Type: other Location: 83966-84865 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGDV01000099.1 Bacteroides fragilis str. J38-1 gbfJ381.contig.98, whole genome shotgun sequence

⇒Summary: seq-len = 8355 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 491-8353 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 491-2761 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2781-3725 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3728-4138 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4151-4990 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5010-6149 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6142-7944 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 7949-8353 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JGDV01000041.1 Bacteroides fragilis str. J38-1 gbfJ381.contig.40, whole genome shotgun sequence

⇒Summary: seq-len = 23946 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 228-1452 bp Zoom in on locus 1 x18 CRISPR array Location: 228-1452 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 228-1452 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 228-1452 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)