CRISPRone

CRISPRone report for GCA_000598725.1_ASM59872v1

♦ Seq 1: JGEH01000054.1 Bacteroides fragilis str. 3719 T6 gbf3719T6.contig.53, whole genome shotgun sequence

⇒Summary: seq-len = 67745 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 626-8738 bp Zoom in on locus 1 x17 CRISPR array Location: 626-1903 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 626-1903 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2012-2344 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2348-3280 bp Gene: unk Type: unknown Location: 3400-3708 bp Gene: unk Type: unknown Location: 3775-4299 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4315-8625 bp antiRepeat Location: 8693-8738 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 626-1903 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGEH01000048.1 Bacteroides fragilis str. 3719 T6 gbf3719T6.contig.47, whole genome shotgun sequence

⇒Summary: seq-len = 650508 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 218435-222048 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 218435-219103 bp Gene: unk Type: unknown Location: 219106-219879 bp Gene: unk Type: unknown Location: 219887-221152 bp Gene: pfam13280:WYL Type: other Location: 221149-222048 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)