CRISPRone

CRISPRone report for GCA_000598825.1_ASM59882v1

♦ Seq 1: JGDM01000080.1 Bacteroides fragilis str. 2-F-2 #4 gbf2F24.contig.80, whole genome shotgun sequence

⇒Summary: seq-len = 152465 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61438-65048 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 61438-62106 bp Gene: unk Type: unknown Location: 62109-62879 bp Gene: unk Type: unknown Location: 62887-64152 bp Gene: pfam13280:WYL Type: other Location: 64149-65048 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGDM01000098.1 Bacteroides fragilis str. 2-F-2 #4 gbf2F24.contig.98, whole genome shotgun sequence

⇒Summary: seq-len = 151421 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1364-8931 bp Zoom in on locus 1 x10 CRISPR array Location: 1364-2099 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1364-2099 bp Num of repeats: 10 Spacers: s1-s9 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2208-2540 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2544-3476 bp Gene: unk Type: unknown Location: 3613-3903 bp Gene: unk Type: unknown Location: 4094-4492 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4508-8818 bp antiRepeat Location: 8886-8931 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1364-2099 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)