CRISPRone

CRISPRone report for GCA_000598845.1_ASM59884v1

♦ Seq 1: JGDP01000090.1 Bacteroides fragilis str. 3719 A10 gbf3719A10.contig.89, whole genome shotgun sequence

⇒Summary: seq-len = 335248 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 296720-312617 bp Zoom in on locus 1 x32 Gene: cls000004:cas6 Type: other Location: 296720-297451 bp Gene: unk Type: unknown Location: 297469-298095 bp Gene: unk Type: unknown Location: 298071-298850 bp Gene: cash17:cash17 Type: Type- Location: 298895-300322 bp Gene: unk Type: unknown Location: 300319-300798 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 300812-302221 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 302226-304028 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 304021-305160 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 305180-306019 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 306032-306442 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 306439-307389 bp Gene: cd09634:cas1 Type: universal Location: 307409-309679 bp Gene: cd09725:cas2 Type: universal Location: 309673-309963 bp CRISPR array Location: 310411-312617 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 310411-312617 bp Num of repeats: 32 Spacers: s1-s31 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 310411-312617 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGDP01000100.1 Bacteroides fragilis str. 3719 A10 gbf3719A10.contig.99, whole genome shotgun sequence

⇒Summary: seq-len = 142573 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 123213-126826 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 123213-123881 bp Gene: unk Type: unknown Location: 123884-124657 bp Gene: unk Type: unknown Location: 124665-125930 bp Gene: pfam13280:WYL Type: other Location: 125927-126826 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)