CRISPRone

CRISPRone report for GCA_000598925.1_ASM59892v1

♦ Seq 1: JGEG01000072.1 Bacteroides fragilis str. 3397 N3 gbf3397N3.contig.71, whole genome shotgun sequence

⇒Summary: seq-len = 622654 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 486441-502563 bp Zoom in on locus 1 x36 Gene: cls000004:cas6 Type: other Location: 486441-487109 bp Gene: unk Type: unknown Location: 487127-487753 bp Gene: unk Type: unknown Location: 487729-488562 bp Gene: cash17:cash17 Type: Type- Location: 488553-489980 bp Gene: unk Type: unknown Location: 489977-490456 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 490470-491879 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 491884-493686 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 493679-494818 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 494838-495677 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 495690-496100 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 496103-497047 bp Gene: cd09634:cas1 Type: universal Location: 497067-499337 bp Gene: cd09725:cas2 Type: universal Location: 499331-499621 bp CRISPR array Location: 500069-502563 bp Num of repeats: 36 Spacers: s1-s35 CRISPR array Location: 500069-502563 bp Num of repeats: 36 Spacers: s1-s35 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 500069-502563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGEG01000082.1 Bacteroides fragilis str. 3397 N3 gbf3397N3.contig.81, whole genome shotgun sequence

⇒Summary: seq-len = 94552 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 76439-80052 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 76439-77107 bp Gene: unk Type: unknown Location: 77110-77883 bp Gene: unk Type: unknown Location: 77891-79156 bp Gene: pfam13280:WYL Type: other Location: 79153-80052 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)