CRISPRone

CRISPRone report for GCA_000598945.1_ASM59894v1

♦ Seq 1: JGEI01000019.1 Bacteroides fragilis str. 3986 N(B)22 gbf3986NB22.contig.18, whole genome shotgun sequence

⇒Summary: seq-len = 573109 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 133908-137521 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 133908-134576 bp Gene: unk Type: unknown Location: 134579-135352 bp Gene: unk Type: unknown Location: 135360-136625 bp Gene: pfam13280:WYL Type: other Location: 136622-137521 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGEI01000014.1 Bacteroides fragilis str. 3986 N(B)22 gbf3986NB22.contig.13, whole genome shotgun sequence

⇒Summary: seq-len = 798787 bp; # of CRISPR array = 1; # of cas gene = 11  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 641197-655418 bp Zoom in on locus 1 x8 Gene: cls000004:cas6 Type: other Location: 641197-641928 bp Gene: unk Type: unknown Location: 641946-642572 bp Gene: unk Type: unknown Location: 642548-643327 bp Gene: cash17:cash17 Type: Type- Location: 643372-644799 bp Gene: unk Type: unknown Location: 644796-645275 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 645289-645540 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 645936-646697 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 646702-648504 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 648497-649636 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 649656-650495 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 650508-650918 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 650915-651865 bp Gene: cd09634:cas1 Type: universal Location: 651885-654155 bp Gene: cd09725:cas2 Type: universal Location: 654149-654439 bp CRISPR array Location: 654887-655418 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 654887-655418 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 654887-655418 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)