CRISPRone

CRISPRone report for GCA_000598965.1_ASM59896v1

♦ Seq 1: JGEJ01000018.1 Bacteroides fragilis str. 3986 T(B)13 gbf3986TB13.contig.17, whole genome shotgun sequence

⇒Summary: seq-len = 510426 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 135034-138647 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 135034-135702 bp Gene: unk Type: unknown Location: 135705-136478 bp Gene: unk Type: unknown Location: 136486-137751 bp Gene: pfam13280:WYL Type: other Location: 137748-138647 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGEJ01000010.1 Bacteroides fragilis str. 3986 T(B)13 gbf3986TB13.contig.9, whole genome shotgun sequence

⇒Summary: seq-len = 182111 bp; # of CRISPR array = 1; # of cas gene = 11  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24488-38646 bp Zoom in on locus 1 x8 Gene: cls000004:cas6 Type: other Location: 24488-25156 bp Gene: unk Type: unknown Location: 25174-25800 bp Gene: unk Type: unknown Location: 25776-26555 bp Gene: cash17:cash17 Type: Type- Location: 26600-28027 bp Gene: unk Type: unknown Location: 28024-28503 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 28517-28768 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 29164-29925 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 29930-31732 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 31725-32864 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 32884-33723 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 33736-34146 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 34149-35093 bp Gene: cd09634:cas1 Type: universal Location: 35113-37383 bp Gene: cd09725:cas2 Type: universal Location: 37377-37667 bp CRISPR array Location: 38115-38646 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 38115-38646 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38115-38646 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)