CRISPRone

CRISPRone report for GCA_000599005.1_ASM59900v1

♦ Seq 1: JGEM01000074.1 Bacteroides fragilis str. S24L15 gbfS24L15.contig.75, whole genome shotgun sequence

⇒Summary: seq-len = 203687 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 102408-106021 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 102408-103076 bp Gene: unk Type: unknown Location: 103079-103852 bp Gene: unk Type: unknown Location: 103860-105125 bp Gene: pfam13280:WYL Type: other Location: 105122-106021 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGEM01000086.1 Bacteroides fragilis str. S24L15 gbfS24L15.contig.87, whole genome shotgun sequence

⇒Summary: seq-len = 422931 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1042-8537 bp Zoom in on locus 1 x9 CRISPR array Location: 1042-1702 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 1042-1702 bp Num of repeats: 9 Spacers: s1-s8 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 1811-2143 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2147-3079 bp Gene: unk Type: unknown Location: 3199-3507 bp Gene: unk Type: unknown Location: 3574-4098 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4114-8424 bp antiRepeat Location: 8492-8537 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1042-1702 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)