CRISPRone

CRISPRone report for GCA_000599165.2_ASM59916v2

♦ Seq 1: JGDO01000047.1 Bacteroides fragilis str. 3397 T14 gbf3397T14.contig.46, whole genome shotgun sequence

⇒Summary: seq-len = 328350 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 119865-123478 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 119865-120533 bp Gene: unk Type: unknown Location: 120536-121309 bp Gene: unk Type: unknown Location: 121317-122582 bp Gene: pfam13280:WYL Type: other Location: 122579-123478 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGDO01000035.1 Bacteroides fragilis str. 3397 T14 gbf3397T14.contig.34, whole genome shotgun sequence

⇒Summary: seq-len = 299664 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 163394-179516 bp Zoom in on locus 1 x36 Gene: cls000004:cas6 Type: other Location: 163394-164062 bp Gene: unk Type: unknown Location: 164080-164706 bp Gene: unk Type: unknown Location: 164682-165515 bp Gene: cash17:cash17 Type: Type- Location: 165506-166933 bp Gene: unk Type: unknown Location: 166930-167409 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 167423-168832 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 168837-170639 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 170632-171771 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 171791-172630 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 172643-173053 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 173056-174000 bp Gene: cd09634:cas1 Type: universal Location: 174020-176290 bp Gene: cd09725:cas2 Type: universal Location: 176284-176574 bp CRISPR array Location: 177022-179516 bp Num of repeats: 36 Spacers: s1-s35 CRISPR array Location: 177022-179516 bp Num of repeats: 36 Spacers: s1-s35 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 177022-179516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)