CRISPRone

CRISPRone report for GCA_000599185.2_ASM59918v2

♦ Seq 1: JGDS01000062.1 Bacteroides fragilis str. 3976T8 gbf3976T8.contig.61, whole genome shotgun sequence

⇒Summary: seq-len = 287437 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 200103-203716 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 200103-200771 bp Gene: unk Type: unknown Location: 200774-201547 bp Gene: unk Type: unknown Location: 201555-202820 bp Gene: pfam13280:WYL Type: other Location: 202817-203716 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGDS01000051.1 Bacteroides fragilis str. 3976T8 gbf3976T8.contig.50, whole genome shotgun sequence

⇒Summary: seq-len = 226862 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 189116-203407 bp Zoom in on locus 1 x16 Gene: cls000004:cas6 Type: other Location: 189116-189847 bp Gene: unk Type: unknown Location: 189865-190491 bp Gene: unk Type: unknown Location: 190467-191246 bp Gene: cash17:cash17 Type: Type- Location: 191291-192718 bp Gene: unk Type: unknown Location: 192715-193194 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 193208-194617 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 194622-196424 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 196417-197556 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 197576-198415 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 198428-198838 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 198835-199785 bp Gene: pfam00078:RT Type: other Location: 199805-200707 bp Gene: pfam01867:cas1 Type: universal Location: 200716-201876 bp CRISPR array Location: 202324-203407 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 202324-203407 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 202324-203407 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)