CRISPRone

CRISPRone report for GCA_000599205.1_ASM59920v1

♦ Seq 1: JGDW01000018.1 Bacteroides fragilis str. Korea 419 gbfKorea419.contig.17, whole genome shotgun sequence

⇒Summary: seq-len = 422828 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 345223-348836 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 345223-346122 bp Gene: unk Type: unknown Location: 346119-347384 bp Gene: unk Type: unknown Location: 347392-348165 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 348168-348836 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGDW01000066.1 Bacteroides fragilis str. Korea 419 gbfKorea419.contig.65, whole genome shotgun sequence

⇒Summary: seq-len = 66851 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20279-22595 bp Zoom in on locus 1 x9 CRISPR array Location: 20279-20821 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 20279-20821 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09725:cas2 Type: universal Location: 21034-21297 bp Gene: cd09722:cas1 Type: universal Location: 21300-21539 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 21532-21912 bp Gene: cd09652:cas6 Type: other Location: 21924-22595 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20279-20821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JGDW01000065.1 Bacteroides fragilis str. Korea 419 gbfKorea419.contig.64, whole genome shotgun sequence

⇒Summary: seq-len = 179356 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28375-43134 bp Zoom in on locus 1 x16 Gene: cls000004:cas6 Type: other Location: 28375-29106 bp Gene: unk Type: unknown Location: 29124-29750 bp Gene: unk Type: unknown Location: 29726-30505 bp Gene: cash17:cash17 Type: Type- Location: 30550-31977 bp Gene: unk Type: unknown Location: 31974-32453 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 32467-33876 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 33881-35683 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 35676-36815 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 36835-37674 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 37687-38097 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 38094-39044 bp Gene: cd09634:cas1 Type: universal Location: 39064-41334 bp Gene: cd09725:cas2 Type: universal Location: 41328-41618 bp CRISPR array Location: 42066-43134 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 42066-43134 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 42066-43134 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)