CRISPRone

CRISPRone report for GCA_000601115.1_ASM60111v1

♦ Seq 1: JGVG01000012.1 Bacteroides fragilis str. 3986 N3 gbf3986N3.contig.11, whole genome shotgun sequence

⇒Summary: seq-len = 511136 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 134400-138013 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 134400-135068 bp Gene: unk Type: unknown Location: 135071-135844 bp Gene: unk Type: unknown Location: 135852-137117 bp Gene: pfam13280:WYL Type: other Location: 137114-138013 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JGVG01000009.1 Bacteroides fragilis str. 3986 N3 gbf3986N3.contig.8, whole genome shotgun sequence

⇒Summary: seq-len = 1383888 bp; # of CRISPR array = 1; # of cas gene = 11  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1000548-1014706 bp Zoom in on locus 1 x8 Gene: cls000004:cas6 Type: other Location: 1000548-1001216 bp Gene: unk Type: unknown Location: 1001234-1001860 bp Gene: unk Type: unknown Location: 1001836-1002615 bp Gene: cash17:cash17 Type: Type- Location: 1002660-1004087 bp Gene: unk Type: unknown Location: 1004084-1004563 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 1004577-1004828 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 1005224-1005985 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 1005990-1007792 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1007785-1008924 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 1008944-1009783 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 1009796-1010206 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 1010209-1011153 bp Gene: cd09634:cas1 Type: universal Location: 1011173-1013443 bp Gene: cd09725:cas2 Type: universal Location: 1013437-1013727 bp CRISPR array Location: 1014175-1014706 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 1014175-1014706 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1014175-1014706 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)