CRISPRone

CRISPRone report for GCA_000629025.1_Pseu_aeru_BWH036_V1

♦ Seq 1: KK211953.1 Pseudomonas aeruginosa BWH036 genomic scaffold adTyH-supercont1.23, whole genome shotgun sequence

⇒Summary: seq-len = 94854 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14244-22984 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 14244-15113 bp Gene: unk Type: unknown Location: 15454-15666 bp Gene: unk Type: unknown Location: 15772-17910 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 17907-19691 bp Gene: cd09639:cas3 Type: Type-I Location: 20618-22984 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KK211950.1 Pseudomonas aeruginosa BWH036 genomic scaffold adTyH-supercont1.20, whole genome shotgun sequence

⇒Summary: seq-len = 111582 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8-216 bp Zoom in on locus 1 x4 CRISPR array Location: 8-216 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 8-216 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8-216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: KK211967.1 Pseudomonas aeruginosa BWH036 genomic scaffold adTyH-supercont1.37, whole genome shotgun sequence

⇒Summary: seq-len = 49054 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38399-48457 bp Zoom in on locus 1 x10 x10 CRISPR array Location: 38399-38966 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 38399-38966 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 39149-39712 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39716-40744 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40755-41738 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41725-43026 bp Gene: COG1203:cas3 Type: Type-I Location: 43437-46667 bp Gene: cd09718:cas1 Type: universal Location: 46664-47638 bp CRISPR array Location: 47890-48457 bp Num of repeats: 10 Spacers: s10-s18 CRISPR array Location: 47890-48457 bp Num of repeats: 10 Spacers: s10-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38399-38966 bp]: array | spacers
           [Locus range 47890-48457 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)