CRISPRone

CRISPRone report for GCA_000629065.1_Pseu_aeru_BWH033_V1

♦ Seq 1: KK212129.1 Pseudomonas aeruginosa BWH033 genomic scaffold adTzk-supercont1.53, whole genome shotgun sequence

⇒Summary: seq-len = 9073 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8-9067 bp Zoom in on locus 1 x3 x6 CRISPR array Location: 8-156 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 8-156 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09739:cas6f Type: other Location: 339-902 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 906-1934 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1945-2928 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2915-4219 bp Gene: COG1203:cas3 Type: Type-I Location: 4277-7507 bp Gene: cd09718:cas1 Type: universal Location: 7504-8478 bp CRISPR array Location: 8740-9067 bp Num of repeats: 6 Spacers: s3-s7 CRISPR array Location: 8740-9067 bp Num of repeats: 6 Spacers: s3-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8-156 bp]: array | spacers
           [Locus range 8740-9067 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KK212110.1 Pseudomonas aeruginosa BWH033 genomic scaffold adTzk-supercont1.34, whole genome shotgun sequence

⇒Summary: seq-len = 37051 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36938-37026 bp Zoom in on locus 1 x2 CRISPR array Location: 36938-37026 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 36938-37026 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 36938-37026 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: KK212157.1 Pseudomonas aeruginosa BWH033 genomic scaffold adTzk-supercont1.81, whole genome shotgun sequence

⇒Summary: seq-len = 1191 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9-96 bp Zoom in on locus 1 x2 CRISPR array Location: 9-96 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 9-96 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 9-96 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)