CRISPRone

CRISPRone report for GCA_000629225.1_Pseu_aeru_3578_V1

♦ Seq 1: KK212720.1 Pseudomonas aeruginosa 3578 genomic scaffold adTxa-supercont1.76, whole genome shotgun sequence

⇒Summary: seq-len = 3845 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3130-3411 bp Zoom in on locus 1 Gene: pfam09827:cas2 Type: universal Location: 3130-3411 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KK212703.1 Pseudomonas aeruginosa 3578 genomic scaffold adTxa-supercont1.59, whole genome shotgun sequence

⇒Summary: seq-len = 8414 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 526-8412 bp Zoom in on locus 1 x2 Gene: cd09641:cas3HD Type: Type-I Location: 526-2760 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 2810-3484 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 3481-5274 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 5271-6140 bp Gene: pfam01930:cas4 Type: Type-I Location: 6159-6791 bp Gene: cd09721:cas1 Type: universal Location: 6795-7835 bp Gene: cd09725:cas2 Type: universal Location: 7845-8135 bp CRISPR array Location: 8315-8412 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 8315-8412 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8315-8412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)