CRISPRone

CRISPRone report for GCA_000629425.1_Pseu_aeru_BWH058_V1

♦ Seq 1: KK213183.1 Pseudomonas aeruginosa BWH058 genomic scaffold adTyf-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 3661179 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2951169-2962574 bp Zoom in on locus 1 x24 x23 CRISPR array Location: 2951169-2952578 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 2951169-2952578 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09739:cas6f Type: other Location: 2952827-2953390 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2953394-2954422 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2954433-2955416 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2955403-2956707 bp Gene: COG1203:cas3 Type: Type-I Location: 2956765-2959995 bp Gene: cd09718:cas1 Type: universal Location: 2959992-2960966 bp CRISPR array Location: 2961227-2962574 bp Num of repeats: 23 Spacers: s24-s45 CRISPR array Location: 2961227-2962574 bp Num of repeats: 23 Spacers: s24-s45 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2951169-2952578 bp]: array | spacers
           [Locus range 2961227-2962574 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KK213184.1 Pseudomonas aeruginosa BWH058 genomic scaffold adTyf-supercont1.2, whole genome shotgun sequence

⇒Summary: seq-len = 1417882 bp; # of CRISPR array = 0; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1293161-1306251 bp 2 Locus 2: 1324839-1337582 bp Zoom in on locus 1 Zoom in on locus 2 Gene: COG0640:csa3 Type: Subtype-I-A Location: 1293161-1293466 bp Gene: unk Type: unknown Location: 1294002-1294592 bp Gene: cd09641:cas3HD Type: Type-I Location: 1294408-1296267 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 1305949-1306251 bp Gene: cd06127:DEDDh Type: Type-I Location: 1324839-1325384 bp Gene: unk Type: unknown Location: 1332848-1333312 bp Gene: mkCas0071:csa5gr11 Type: Subtype-I-A Location: 1333437-1335422 bp Gene: unk Type: unknown Location: 1335465-1336514 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 1336665-1337582 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)