CRISPRone

CRISPRone report for GCA_000629605.1_Pseu_aeru_BWH049_V1

♦ Seq 1: KK213281.1 Pseudomonas aeruginosa BWH049 genomic scaffold adTyP-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 2208118 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 744291-744620 bp Zoom in on locus 1 x6 CRISPR array Location: 744291-744620 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 744291-744620 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 744291-744620 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KK213288.1 Pseudomonas aeruginosa BWH049 genomic scaffold adTyP-supercont1.8, whole genome shotgun sequence

⇒Summary: seq-len = 325264 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62095-72044 bp Zoom in on locus 1 x16 x8 CRISPR array Location: 62095-63023 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 62095-63023 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 63206-63769 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 63773-64801 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 64812-65795 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 65782-67086 bp Gene: COG1203:cas3 Type: Type-I Location: 67144-70374 bp Gene: cd09718:cas1 Type: universal Location: 70371-71345 bp CRISPR array Location: 71597-72044 bp Num of repeats: 8 Spacers: s16-s22 CRISPR array Location: 71597-72044 bp Num of repeats: 8 Spacers: s16-s22 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 62095-63023 bp]: array | spacers
           [Locus range 71597-72044 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)