CRISPRone

CRISPRone report for GCA_000710365.3_ASM71036v3

♦ Seq 1: CP036546.1 Bacteroides fragilis strain DCMSKEJBY0001B chromosome, complete genome

⇒Summary: seq-len = 5325251 bp; # of CRISPR array = 2; # of cas gene = 10  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3058504-3058814 bp 2 Locus 2: 3935808-3945365 bp 3 Locus 3: 5031605-5035215 bp Zoom in on locus 1 x5 Zoom in on locus 2 x26 Zoom in on locus 3 CRISPR array Location: 3058504-3058814 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 3058504-3058814 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 3935808-3937438 bp Num of repeats: 26 Spacers: s5-s29 CRISPR array Location: 3935808-3937438 bp Num of repeats: 26 Spacers: s5-s29 Gene: cd09725:cas2 Type: universal Location: 3937652-3937915 bp Gene: cd09722:cas1 Type: universal Location: 3937995-3938996 bp Gene: pfam01930:cas4 Type: Type-I Location: 3938993-3939550 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 3939570-3940628 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 3940641-3941966 bp Gene: COG1203:cas3 Type: Type-I Location: 3941970-3944129 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 3944119-3944682 bp Gene: cd09652:cas6 Type: other Location: 3944694-3945365 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 5031605-5032270 bp Gene: unk Type: unknown Location: 5032273-5033046 bp Gene: unk Type: unknown Location: 5033054-5034319 bp Gene: pfam13280:WYL Type: other Location: 5034316-5035215 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3058504-3058814 bp]: array | spacers
           [Locus range 3935808-3937438 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)