CRISPRone

CRISPRone report for GCA_000710625.1_MRSN18971scaf

♦ Seq 1: JFJU01000001.1 Pseudomonas aeruginosa strain MRSN18971 scaffold00001, whole genome shotgun sequence

⇒Summary: seq-len = 1228470 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 309739-310309 bp Zoom in on locus 1 x10 CRISPR array Location: 309739-310309 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 309739-310309 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 309739-310309 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JFJU01000010.1 Pseudomonas aeruginosa strain MRSN18971 scaffold00010, whole genome shotgun sequence

⇒Summary: seq-len = 189825 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 146153-155494 bp Zoom in on locus 1 x24 Gene: cd09641:cas3HD Type: Type-I Location: 146153-148387 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 148438-149112 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 149109-150872 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 150884-151753 bp Gene: pfam01930:cas4 Type: Type-I Location: 151772-152404 bp Gene: cd09721:cas1 Type: universal Location: 152524-153447 bp Gene: cd09725:cas2 Type: universal Location: 153457-153747 bp CRISPR array Location: 153929-155494 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 153929-155494 bp Num of repeats: 24 Spacers: s1-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 153929-155494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)