CRISPRone

CRISPRone report for GCA_000786565.1_ASM78656v1

♦ Seq 1: JRGP01000058.1 Pseudomonas aeruginosa strain PS3 contig_58, whole genome shotgun sequence

⇒Summary: seq-len = 42277 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31564-42149 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 31564-33108 bp Gene: unk Type: unknown Location: 34192-34371 bp Gene: unk Type: unknown Location: 34555-34953 bp Gene: pfam00078:RT Type: other Location: 35103-36371 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 41280-42149 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JRGP01000043.1 Pseudomonas aeruginosa strain PS3 contig_43, whole genome shotgun sequence

⇒Summary: seq-len = 51814 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 50744-51010 bp Zoom in on locus 1 x5 CRISPR array Location: 50744-51010 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 50744-51010 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 50744-51010 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)