CRISPRone

CRISPRone report for GCA_000789725.1_AZPAE14941

♦ Seq 1: JTRA01000044.1 Pseudomonas aeruginosa strain AZPAE14941 AZPAE14941_contig_44, whole genome shotgun sequence

⇒Summary: seq-len = 33097 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32483-33052 bp Zoom in on locus 1 x10 CRISPR array Location: 32483-33052 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 32483-33052 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 32483-33052 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTRA01000020.1 Pseudomonas aeruginosa strain AZPAE14941 AZPAE14941_contig_20, whole genome shotgun sequence

⇒Summary: seq-len = 59899 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 54942-55269 bp Zoom in on locus 1 x6 CRISPR array Location: 54942-55269 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 54942-55269 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 54942-55269 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JTRA01000053.1 Pseudomonas aeruginosa strain AZPAE14941 AZPAE14941_contig_53, whole genome shotgun sequence

⇒Summary: seq-len = 41429 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16366-27904 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 16366-16668 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 24815-25120 bp Gene: cd09641:cas3HD Type: Type-I Location: 25355-27904 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)