CRISPRone

CRISPRone report for GCA_000789785.1_AZPAE14850

♦ Seq 1: JTUL01000013.1 Pseudomonas aeruginosa strain AZPAE14850 AZPAE14850_contig_13, whole genome shotgun sequence

⇒Summary: seq-len = 97453 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53266-63891 bp Zoom in on locus 1 x13 x21 CRISPR array Location: 53266-54014 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 53266-54014 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 54263-54826 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 54830-55858 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 55869-56852 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 56839-58143 bp Gene: COG1203:cas3 Type: Type-I Location: 58201-61431 bp Gene: cd09718:cas1 Type: universal Location: 61428-62402 bp CRISPR array Location: 62663-63891 bp Num of repeats: 21 Spacers: s13-s32 CRISPR array Location: 62663-63891 bp Num of repeats: 21 Spacers: s13-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53266-54014 bp]: array | spacers
           [Locus range 62663-63891 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)