CRISPRone

CRISPRone report for GCA_000789805.1_AZPAE14848

♦ Seq 1: JTUM01000040.1 Pseudomonas aeruginosa strain AZPAE14848 AZPAE14848_contig_40, whole genome shotgun sequence

⇒Summary: seq-len = 84032 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 82887-83754 bp Zoom in on locus 1 x15 CRISPR array Location: 82887-83754 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 82887-83754 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 82887-83754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTUM01000002.1 Pseudomonas aeruginosa strain AZPAE14848 AZPAE14848_contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 290096 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 128279-138460 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 128279-130552 bp Gene: unk Type: unknown Location: 130549-132189 bp Gene: unk Type: unknown Location: 132539-133120 bp Gene: pfam13280:WYL Type: other Location: 133134-134009 bp Gene: unk Type: unknown Location: 134148-134819 bp Gene: cd09639:cas3 Type: Type-I Location: 134936-138460 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)