CRISPRone

CRISPRone report for GCA_000789845.1_AZPAE14852

♦ Seq 1: JTUJ01000043.1 Pseudomonas aeruginosa strain AZPAE14852 AZPAE14852_contig_43, whole genome shotgun sequence

⇒Summary: seq-len = 185735 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 148854-152647 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 148854-150932 bp Gene: pfam13280:WYL Type: other Location: 150934-151839 bp Gene: pfam09002:csx1 Type: Type-III Location: 152171-152647 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTUJ01000038.1 Pseudomonas aeruginosa strain AZPAE14852 AZPAE14852_contig_38, whole genome shotgun sequence

⇒Summary: seq-len = 65850 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-499 bp Zoom in on locus 1 x9 CRISPR array Location: 0-499 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 0-499 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-499 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)