CRISPRone

CRISPRone report for GCA_000789925.1_AZPAE14855

♦ Seq 1: JTUH01000172.1 Pseudomonas aeruginosa strain AZPAE14855 strain_contig_192, whole genome shotgun sequence

⇒Summary: seq-len = 45428 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34019-43501 bp Zoom in on locus 1 x12 x4 CRISPR array Location: 34019-34707 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 34019-34707 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 34890-35453 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 35457-36485 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36496-37479 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 37466-38770 bp Gene: COG1203:cas3 Type: Type-I Location: 38828-42058 bp Gene: cd09718:cas1 Type: universal Location: 42055-43029 bp CRISPR array Location: 43294-43501 bp Num of repeats: 4 Spacers: s12-s14 CRISPR array Location: 43294-43501 bp Num of repeats: 4 Spacers: s12-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34019-34707 bp]: array | spacers
           [Locus range 43294-43501 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)