CRISPRone

CRISPRone report for GCA_000789935.1_AZPAE15037

♦ Seq 1: JTNJ01000033.1 Pseudomonas aeruginosa strain AZPAE15037 AZPAE15037_contig_33, whole genome shotgun sequence

⇒Summary: seq-len = 116059 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 93139-99927 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 93139-94170 bp Gene: unk Type: unknown Location: 94163-94480 bp Gene: unk Type: unknown Location: 94615-95505 bp Gene: pfam13280:WYL Type: other Location: 95785-96693 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 96706-99927 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTNJ01000023.1 Pseudomonas aeruginosa strain AZPAE15037 AZPAE15037_contig_23, whole genome shotgun sequence

⇒Summary: seq-len = 507724 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 204957-215468 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 204957-205718 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 204957-205718 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 205783-206082 bp Gene: cd09719:cas1 Type: universal Location: 206079-206969 bp Gene: pfam08798:cas6e Type: other Location: 206996-207535 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 207582-208244 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 208246-209388 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 209398-209928 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 209925-211493 bp Gene: cd09641:cas3HD Type: Type-I Location: 211496-214177 bp CRISPR array Location: 214951-215468 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 214951-215468 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 204957-205718 bp]: array | spacers
           [Locus range 214951-215468 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)