CRISPRone

CRISPRone report for GCA_000790115.1_AZPAE15038

♦ Seq 1: JTNI01000057.1 Pseudomonas aeruginosa strain AZPAE15038 AZPAE15038_contig_57, whole genome shotgun sequence

⇒Summary: seq-len = 104354 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71653-82573 bp Zoom in on locus 1 x17 x23 CRISPR array Location: 71653-72640 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 71653-72640 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 72823-73386 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 73390-74418 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 74429-75412 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 75399-76703 bp Gene: COG1203:cas3 Type: Type-I Location: 76761-79991 bp Gene: cd09718:cas1 Type: universal Location: 79988-80962 bp CRISPR array Location: 81223-82573 bp Num of repeats: 23 Spacers: s17-s38 CRISPR array Location: 81223-82573 bp Num of repeats: 23 Spacers: s17-s38 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 71653-72640 bp]: array | spacers
           [Locus range 81223-82573 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)