CRISPRone

CRISPRone report for GCA_000790205.1_AZPAE14866

♦ Seq 1: JTTW01000020.1 Pseudomonas aeruginosa strain AZPAE14866 AZPAE14866_contig_20, whole genome shotgun sequence

⇒Summary: seq-len = 409101 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 58586-69081 bp Zoom in on locus 1 x20 x13 CRISPR array Location: 58586-59753 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 58586-59753 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09739:cas6f Type: other Location: 59936-60499 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 60503-61531 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 61542-62525 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 62512-63816 bp Gene: COG1203:cas3 Type: Type-I Location: 63874-67104 bp Gene: cd09718:cas1 Type: universal Location: 67101-68075 bp CRISPR array Location: 68333-69081 bp Num of repeats: 13 Spacers: s20-s31 CRISPR array Location: 68333-69081 bp Num of repeats: 13 Spacers: s20-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 58586-59753 bp]: array | spacers
           [Locus range 68333-69081 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)