CRISPRone

CRISPRone report for GCA_000790215.1_AZPAE14867

♦ Seq 1: JTTV01000034.1 Pseudomonas aeruginosa strain AZPAE14867 AZPAE14867_contig_34, whole genome shotgun sequence

⇒Summary: seq-len = 78002 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 41408-52868 bp Zoom in on locus 1 x27 x22 CRISPR array Location: 41408-42996 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 41408-42996 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09718:cas1 Type: universal Location: 43257-44231 bp Gene: COG1203:cas3 Type: Type-I Location: 44228-47458 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 47516-48820 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 48807-49790 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 49801-50829 bp Gene: cd09739:cas6f Type: other Location: 50833-51396 bp CRISPR array Location: 51580-52868 bp Num of repeats: 22 Spacers: s27-s47 CRISPR array Location: 51580-52868 bp Num of repeats: 22 Spacers: s27-s47 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 41408-42996 bp]: array | spacers
           [Locus range 51580-52868 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)