CRISPRone

CRISPRone report for GCA_000790265.1_AZPAE14869

♦ Seq 1: JTTT01000002.1 Pseudomonas aeruginosa strain AZPAE14869 AZPAE14869_contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 147802 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22264-34301 bp Zoom in on locus 1 x29 x18 CRISPR array Location: 22264-24002 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 22264-24002 bp Num of repeats: 29 Spacers: s1-s28 Gene: pfam09707:cas2 Type: universal Location: 24067-24366 bp Gene: cd09719:cas1 Type: universal Location: 24363-25253 bp Gene: pfam08798:cas6e Type: other Location: 25280-25819 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 25866-26528 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 26530-27672 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 27682-28212 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 28209-29777 bp Gene: cd09641:cas3HD Type: Type-I Location: 29780-32461 bp CRISPR array Location: 33236-34301 bp Num of repeats: 18 Spacers: s29-s45 CRISPR array Location: 33236-34301 bp Num of repeats: 18 Spacers: s29-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22264-24002 bp]: array | spacers
           [Locus range 33236-34301 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)