CRISPRone

CRISPRone report for GCA_000790525.1_AZPAE14879

♦ Seq 1: JTTJ01000011.1 Pseudomonas aeruginosa strain AZPAE14879 AZPAE14879_contig_11, whole genome shotgun sequence

⇒Summary: seq-len = 530206 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 497328-507888 bp Zoom in on locus 1 x14 x20 CRISPR array Location: 497328-498135 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 497328-498135 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 498318-498881 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 498885-499913 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 499924-500907 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 500894-502198 bp Gene: COG1203:cas3 Type: Type-I Location: 502256-505486 bp Gene: cd09718:cas1 Type: universal Location: 505483-506457 bp CRISPR array Location: 506718-507888 bp Num of repeats: 20 Spacers: s14-s32 CRISPR array Location: 506718-507888 bp Num of repeats: 20 Spacers: s14-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 497328-498135 bp]: array | spacers
           [Locus range 506718-507888 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)