CRISPRone

CRISPRone report for GCA_000790585.1_AZPAE15024

♦ Seq 1: JTNW01000032.1 Pseudomonas aeruginosa strain AZPAE15024 AZPAE15024_contig_32, whole genome shotgun sequence

⇒Summary: seq-len = 64735 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 824-11449 bp Zoom in on locus 1 x21 x13 CRISPR array Location: 824-2053 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 824-2053 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09718:cas1 Type: universal Location: 2313-3287 bp Gene: COG1203:cas3 Type: Type-I Location: 3284-6514 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6572-7876 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7863-8846 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8857-9885 bp Gene: cd09739:cas6f Type: other Location: 9889-10452 bp CRISPR array Location: 10702-11449 bp Num of repeats: 13 Spacers: s21-s32 CRISPR array Location: 10702-11449 bp Num of repeats: 13 Spacers: s21-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 824-2053 bp]: array | spacers
           [Locus range 10702-11449 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)