CRISPRone

CRISPRone report for GCA_000790655.1_AZPAE14884

♦ Seq 1: JTTE01000009.1 Pseudomonas aeruginosa strain AZPAE14884 AZPAE14884_contig_9, whole genome shotgun sequence

⇒Summary: seq-len = 511988 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 138211-148570 bp Zoom in on locus 1 x11 x14 CRISPR array Location: 138211-138839 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 138211-138839 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 139090-140064 bp Gene: COG1203:cas3 Type: Type-I Location: 140061-143291 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 143702-145003 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 144990-145973 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 145984-147012 bp Gene: cd09739:cas6f Type: other Location: 147016-147579 bp CRISPR array Location: 147763-148570 bp Num of repeats: 14 Spacers: s11-s23 CRISPR array Location: 147763-148570 bp Num of repeats: 14 Spacers: s11-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 138211-138839 bp]: array | spacers
           [Locus range 147763-148570 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTTE01000010.1 Pseudomonas aeruginosa strain AZPAE14884 AZPAE14884_contig_10, whole genome shotgun sequence

⇒Summary: seq-len = 952142 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 400098-409137 bp Zoom in on locus 1 x25 Gene: COG1203:cas3 Type: Type-I Location: 400098-401972 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 402023-402697 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 402694-404457 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 404469-405338 bp Gene: pfam01930:cas4 Type: Type-I Location: 405357-405989 bp Gene: cd09721:cas1 Type: universal Location: 405993-407033 bp Gene: cd09725:cas2 Type: universal Location: 407043-407333 bp CRISPR array Location: 407515-409137 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 407515-409137 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 407515-409137 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)