CRISPRone

CRISPRone report for GCA_000790805.1_AZPAE14889

♦ Seq 1: JTSZ01000023.1 Pseudomonas aeruginosa strain AZPAE14889 AZPAE14889_contig_23, whole genome shotgun sequence

⇒Summary: seq-len = 180998 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 106754-117269 bp Zoom in on locus 1 x12 x10 CRISPR array Location: 106754-107456 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 106754-107456 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 108231-110912 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 110915-112483 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 112480-113010 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 113020-114162 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 114164-114826 bp Gene: pfam08798:cas6e Type: other Location: 114801-115412 bp Gene: cd09719:cas1 Type: universal Location: 115439-116329 bp Gene: pfam09707:cas2 Type: universal Location: 116326-116625 bp CRISPR array Location: 116690-117269 bp Num of repeats: 10 Spacers: s12-s20 CRISPR array Location: 116690-117269 bp Num of repeats: 10 Spacers: s12-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 106754-107456 bp]: array | spacers
           [Locus range 116690-117269 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)